BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B11SP1|AL429528
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1339 1655 0.0
>3x_Contig1339
Length = 6194
Score = 1655 bits (835), Expect = 0.0
Identities = 835/835 (100%)
Strand = Plus / Plus
Query: 1 tggctcatcgttaggataaattgaaatcacaatatcattgcatcaaacacagaccaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tggctcatcgttaggataaattgaaatcacaatatcattgcatcaaacacagaccaagga 673
Query: 61 ttctctacagatatctgtctgtttgtgccggtgaagagataattacaaggtcaaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttctctacagatatctgtctgtttgtgccggtgaagagataattacaaggtcaaaatgtg 733
Query: 121 ggaggaattcgacatcacaaagttaccatactatgatccaaaggtcgacaataaagtagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggaggaattcgacatcacaaagttaccatactatgatccaaaggtcgacaataaagtagc 793
Query: 181 cttagtaacaggtgggaattcaggaataggatactatactgtgttgcatttatatctaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cttagtaacaggtgggaattcaggaataggatactatactgtgttgcatttatatctaca 853
Query: 241 tggattcaaagtatacctaggtggcagaaatagcagtcgagtgaaccatgccattaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tggattcaaagtatacctaggtggcagaaatagcagtcgagtgaaccatgccattaaaga 913
Query: 301 aatcaagaaagaagcagaaatacgtcttcggaagggacaagatgagaagcctcatgatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aatcaagaaagaagcagaaatacgtcttcggaagggacaagatgagaagcctcatgatgg 973
Query: 361 tttaatgattagaaaaaccggaaaacttgaatatcttcatattgatttaacagatttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 tttaatgattagaaaaaccggaaaacttgaatatcttcatattgatttaacagatttgaa 1033
Query: 421 ctcggtggagaaagccgctactaagttcactgtacaagaagaccatttggatgttttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 ctcggtggagaaagccgctactaagttcactgtacaagaagaccatttggatgttttgat 1093
Query: 481 aaacaatgcaggagtgatggctataccatacgagttaacaaaggacaactttgagataca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 aaacaatgcaggagtgatggctataccatacgagttaacaaaggacaactttgagataca 1153
Query: 541 gatgcaaaccaactacgtctcacattttctactcacaatgagattgttacccttaatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 gatgcaaaccaactacgtctcacattttctactcacaatgagattgttacccttaatcaa 1213
Query: 601 agccagaaagggtagagtgataactgtgtcatctttagggcataatctaatatttttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 agccagaaagggtagagtgataactgtgtcatctttagggcataatctaatatttttcaa 1273
Query: 661 ctgcaaccctggcgcgcagttcaactactggccaagtatgttctttatgtggtgccgtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 ctgcaaccctggcgcgcagttcaactactggccaagtatgttctttatgtggtgccgtta 1333
Query: 721 tgccttggcgaaaacagcatccatccaattcaccaaaatgctagccatcaagaaccctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 tgccttggcgaaaacagcatccatccaattcaccaaaatgctagccatcaagaaccctga 1393
Query: 781 cattctttgtatgtccttgcatccaggcctggtgatgaatacgaatctattcagt 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 cattctttgtatgtccttgcatccaggcctggtgatgaatacgaatctattcagt 1448
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6084
Number of Sequences: 1807
Number of extensions: 6084
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)